Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3017

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3017: 11385 - Hypothetical Protein, at 82,759 to 83,226 11385

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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81,789 - -1.1
81,812 - +0.6
83,384 + +0.3
83,449 - +1.8
83,523 - +2.9
83,527 - -0.5
83,546 + +0.7
83,554 + -1.2
83,577 + +0.1
83,939 - -1.2
84,196 + +0.2
84,226 - -0.8

Or see this region's nucleotide sequence