Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3019

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3019: 11387 - KOG2128 Ras GTPase-activating protein family - IQGAP, at 111,732 to 112,142 11387

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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110,746 - +1.8
111,491 - -1.4
112,030 + 11387 mRNA_3019 0.73 +0.9
112,143 + -0.2
112,151 + +1.1
112,319 - -0.8
112,322 - -0.4
112,734 - +0.9
112,760 - -1.7

Or see this region's nucleotide sequence