Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3267

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11634 and 11635 are separated by 624 nucleotides11635 and 11636 are separated by 205 nucleotides mRNA_3266: 11634 - K14763 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1, at 246,673 to 247,957 11634 mRNA_3267: 11635 - K02357 tsf, TSFM elongation factor Ts, at 248,582 to 249,766 11635 mRNA_3268: 11636 - Hypothetical Protein, at 249,972 to 250,888 11636

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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248,340 - -0.1
248,500 - +0.7
249,680 + -1.5
249,862 - +1.4
249,974 + -1.5
250,427 + 11636 mRNA_3268 0.50 +0.7

Or see this region's nucleotide sequence