Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4001

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,119,611 - +1.2
1,120,564 + 12369 mRNA_4001 0.24 +1.7
1,120,622 + 12369 mRNA_4001 0.32 +2.9
1,120,720 + 12369 mRNA_4001 0.46 -0.0
1,121,000 - 12369 mRNA_4001 0.85 -0.2
1,121,867 - +0.5
1,121,874 - +0.5
1,121,890 - +0.9

Or see this region's nucleotide sequence