Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4579

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163 12947

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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507,682 + -0.5
507,721 - -0.0
507,735 + -0.6
507,751 - +0.7
507,775 - -1.0
507,779 - -1.9
507,786 - -1.3
507,800 - -0.1
507,802 - -1.2
507,802 + -0.5
507,807 + +0.1
507,946 + -0.2
507,977 - +1.4
507,990 + -1.7
507,993 - -0.6
507,994 + -0.7
507,996 + -0.1
508,007 - -1.6
508,012 + +0.5
508,033 + -1.1
508,037 + +1.2
508,039 + -0.0
508,042 - -4.1
508,052 - -0.0
508,065 + +0.5
508,084 - -0.6
508,304 + +0.1
508,870 - +0.1
509,022 + 12947 mRNA_4579 0.14 -0.0
510,496 + 12947 mRNA_4579 0.73 -2.0
510,503 + 12947 mRNA_4579 0.73 +1.2
510,629 + 12947 mRNA_4579 0.79 -0.7
510,777 + 12947 mRNA_4579 0.84 -2.8
510,801 + 12947 mRNA_4579 0.85 +0.4
510,932 + -0.3
510,950 + -1.4
511,058 - +0.4
511,064 - -0.5
511,215 - +0.2
511,228 - -0.4
511,236 + -1.1
511,237 - +0.1
511,266 - +1.1
511,276 + +0.0
511,279 + +0.2
511,280 - -0.5
511,296 + +0.4
511,328 + +1.3
511,394 - -1.4
511,413 - -0.7
511,424 + +1.0
511,425 + +0.3
511,537 - +0.3
511,538 - -0.3
511,586 - -0.1
511,690 - -1.4
511,842 - -0.2
511,852 - -0.5
512,140 - -0.6
512,140 + +1.0
512,145 - -3.8
512,155 + -0.0

Or see this region's nucleotide sequence