Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4696

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13064 and 13065 are separated by 323 nucleotides mRNA_4696: 13064 - KOG1756 Histone 2A, at 796,428 to 796,805 13064 mRNA_4697: 13065 - K05291 PIGS phosphatidylinositol glycan, class S, at 797,129 to 800,158 13065

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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795,551 - -0.3
795,567 - -0.2
795,573 + +0.6
796,013 - +1.2
796,299 - +1.2
796,383 - +0.2
796,402 - -1.2
797,567 - 13065 mRNA_4697 0.14 +0.1

Or see this region's nucleotide sequence