Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4791

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13159 and 13160 are separated by 940 nucleotides mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,020,628 + +0.6
1,020,742 + -1.6
1,021,367 - +0.6
1,021,455 - +0.2
1,021,910 + 13159 mRNA_4791 0.26 -1.3
1,022,383 + 13159 mRNA_4791 0.63 -1.4
1,022,536 + 13159 mRNA_4791 0.74 +0.6
1,022,557 - 13159 mRNA_4791 0.76 -2.3
1,022,586 - 13159 mRNA_4791 0.78 +0.9
1,022,689 - 13159 mRNA_4791 0.86 +0.8
1,023,135 - -0.2
1,023,154 + +0.9
1,023,295 + +1.1
1,023,414 - +1.8
1,023,429 + +0.5
1,023,448 + +0.4
1,023,525 - -0.1
1,023,707 - +0.1

Or see this region's nucleotide sequence