Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5256

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863 13624

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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291,455 + -0.4
291,587 - -0.6
291,589 + -1.4
291,602 + +0.1
291,727 - -0.4
291,745 + -0.2
291,745 + -1.3
291,747 + +1.0
291,753 + -0.5
291,754 + -0.6
291,756 - -1.9
291,757 + -1.8
291,758 - -1.2
291,826 + -0.7
291,835 + -0.4
291,923 - -2.3
292,115 - +0.3
292,130 + -1.7
292,286 + +1.5
292,699 - 13624 mRNA_5256 0.32 -0.4
293,052 - 13624 mRNA_5256 0.53 +1.6
293,080 + 13624 mRNA_5256 0.54 +1.7
293,460 + 13624 mRNA_5256 0.77 +0.8
293,631 - 13624 mRNA_5256 0.86 +0.5
294,099 - +0.2
294,199 + +2.1
294,365 + +2.2
294,376 + -1.6
294,509 + +0.8
294,514 + +0.9
294,534 + -0.9
294,672 + -0.3
294,679 + +1.0
294,686 + -0.6
294,692 + -0.5
294,696 + +0.1
294,700 + +0.1
294,700 - -0.0
294,725 + -1.8
294,797 + +2.0
294,861 + -1.4

Or see this region's nucleotide sequence