Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5382

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5382: 13750 - Hypothetical Protein, at 608,792 to 609,334 13750

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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607,859 - +0.8
608,177 - +1.2
608,705 - -1.0
608,710 - +1.9
608,788 - -1.4
608,890 + 13750 mRNA_5382 0.18 +0.5
609,028 + 13750 mRNA_5382 0.43 +0.1
609,177 - 13750 mRNA_5382 0.71 -1.0
609,178 + 13750 mRNA_5382 0.71 +1.5
609,178 - 13750 mRNA_5382 0.71 +1.9
609,425 - -0.1
609,484 - -0.6
609,504 + -1.5
609,513 - -1.6
609,629 + +0.7
609,651 - +0.1
609,834 + -0.2
609,951 + +1.6
610,030 - +0.1
610,081 - -0.9
610,108 - +0.3
610,109 - +3.1
610,220 + +1.3

Or see this region's nucleotide sequence