Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5387

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5387: 13755 - Hypothetical Protein, at 624,312 to 624,933 13755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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623,478 - -0.2
623,731 - +1.1
623,852 - -0.0
623,872 + +1.2
624,032 + +1.3
624,058 + -1.6
624,693 + 13755 mRNA_5387 0.61 +0.2
624,699 + 13755 mRNA_5387 0.62 +0.4
624,796 + 13755 mRNA_5387 0.78 +1.6
624,813 + 13755 mRNA_5387 0.81 -0.8
624,828 + 13755 mRNA_5387 0.83 -1.2
625,098 + +0.4
625,158 - +0.5
625,257 + -0.9
625,382 - +0.8
625,434 + +0.6
625,522 + -1.4
625,544 - -1.7
625,599 - +1.5
625,653 + -1.7
625,690 + -0.2
625,717 + -0.1
625,726 + +0.3
625,726 + -0.3
625,809 + -0.1
625,882 - +1.2

Or see this region's nucleotide sequence