Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5837

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14203 and 14205 are separated by 68 nucleotides14205 and 14206 are separated by 187 nucleotides mRNA_5835: 14203 - Hypothetical Protein, at 1,051,444 to 1,053,111 14203 mRNA_5837: 14205 - Hypothetical Protein, at 1,053,180 to 1,053,560 14205 mRNA_5838: 14206 - Hypothetical Protein, at 1,053,748 to 1,057,363 14206

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,052,280 + 14203 mRNA_5835 0.50 +1.3
1,052,433 + 14203 mRNA_5835 0.59 +2.6
1,052,717 - 14203 mRNA_5835 0.76 +0.5
1,052,992 - +1.6
1,053,011 - -0.3
1,053,020 - +1.8
1,053,134 - -0.2
1,053,176 - +0.6
1,053,302 - 14205 mRNA_5837 0.32 +1.5
1,053,302 + 14205 mRNA_5837 0.32 -1.1
1,053,316 - 14205 mRNA_5837 0.36 -1.6
1,053,331 - 14205 mRNA_5837 0.40 -0.5
1,053,455 - 14205 mRNA_5837 0.72 -0.4
1,053,597 - +1.2
1,053,773 - -0.4
1,054,005 + +1.3
1,054,455 + 14206 mRNA_5838 0.20 -0.9

Or see this region's nucleotide sequence