Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5900

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14268 and 14269 are separated by 168 nucleotides mRNA_5900: 14268 - KOG4778 Mitochondrial ribosomal protein L28, at 1,200,397 to 1,201,096 14268 mRNA_5901: 14269 - K07204 RAPTOR regulatory associated protein of mTOR, at 1,201,265 to 1,206,244 14269

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,199,454 - +0.6
1,199,873 + +0.8
1,199,930 + -0.2
1,200,011 - -0.1
1,200,016 + +0.0
1,200,026 - -0.3
1,200,209 + -1.9
1,200,331 - -0.4
1,200,342 - +1.1
1,200,343 + +1.9
1,200,353 + +0.2
1,200,359 + -0.0
1,200,363 + -0.2
1,200,378 + +0.4
1,200,391 + +1.1
1,201,127 + +2.0
1,201,380 - +0.9

Or see this region's nucleotide sequence