Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6140

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6140: 14508 - K20463 OSBPL3_6_7, ORP3_6_7 oxysterol-binding protein-related protein 3/6/7, at 102,447 to 105,557 14508

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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101,595 - +0.0
101,866 + -1.4
102,058 - -0.2
102,174 + -0.4
102,245 - +0.6
102,642 + -0.7
102,770 + 14508 mRNA_6140 0.10 -1.9
103,014 - 14508 mRNA_6140 0.18 -1.0
103,108 + 14508 mRNA_6140 0.21 -1.1
103,144 + 14508 mRNA_6140 0.22 -0.4
103,166 + 14508 mRNA_6140 0.23 -0.7
103,398 + 14508 mRNA_6140 0.31 +0.6
103,996 - 14508 mRNA_6140 0.50 -0.1
104,080 - 14508 mRNA_6140 0.52 +0.0
104,347 + 14508 mRNA_6140 0.61 -1.2
105,349 + +0.5
105,453 - +0.7
105,482 - -0.5
105,505 - -0.3
105,648 + +0.4
105,657 + -0.2
105,769 - +0.4
105,791 - +0.3
105,801 - +0.4
105,818 + +1.8
105,823 + +1.3
105,825 - -0.0
105,829 - +1.2
105,830 + +0.0
105,839 - +0.2
105,841 - +0.5
105,842 + -1.0
105,850 - +0.6
105,851 + +1.2
105,851 + +0.9
105,858 + -0.5
105,867 - -1.7
105,871 - +1.6
105,882 - +0.7
105,996 + +0.6
106,003 + -0.3
106,080 - -2.3
106,316 - -1.2

Or see this region's nucleotide sequence