Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6209

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252,444 to 258,337 14577

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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251,589 - +0.3
251,605 + -1.5
251,630 + +0.8
251,634 + +1.1
251,712 + -2.7
251,734 - -0.9
251,888 + -1.7
251,913 + -0.7
252,328 + -0.8
258,418 + +1.0
258,518 + +0.6
258,530 - +0.2
258,555 - -2.1
258,683 - +0.7
258,684 - +0.8
258,703 - +0.9
258,708 + -0.3
258,857 - -1.7
258,986 + -1.4
258,989 + -0.3
259,000 + -0.6
259,012 + -0.1
259,283 + +0.5
259,301 + -0.0

Or see this region's nucleotide sequence