Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6219

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14586 and 14587 are separated by 435 nucleotides mRNA_6218: 14586 - K03687 GRPE molecular chaperone GrpE, at 277,373 to 277,948 14586 mRNA_6219: 14587 - HMMPfam-Sec20-PF03908, at 278,384 to 280,109 14587

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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278,365 - -0.7
279,839 + 14587 mRNA_6219 0.84 -0.9
279,851 - 14587 mRNA_6219 0.85 -1.0
279,985 + -0.9
280,580 + +1.1
280,602 + -0.1

Or see this region's nucleotide sequence