Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6239

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6239: 14607 - K01372 BLMH, pepC bleomycin hydrolase, at 328,080 to 329,843 14607

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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327,103 - -0.6
327,118 + -1.3
327,367 - -0.8
327,412 + -0.5
327,530 - -1.8
327,539 + -0.5
327,547 - -0.0
327,550 + +1.9
327,553 - -0.2
327,564 - -1.2
327,703 + -2.6
327,779 - -1.1
327,808 - +1.5
327,810 + +1.9
327,821 + -0.9
327,825 + +0.5
327,837 + +0.5
327,854 - -1.3
327,862 + -0.5
327,862 + -0.8
327,881 + +0.8
327,986 - -1.4
328,015 + -0.2
328,020 - +3.4
328,119 - -1.1
328,160 - +0.4
328,311 + 14607 mRNA_6239 0.13 +0.0
328,314 - 14607 mRNA_6239 0.13 +0.5
328,631 + 14607 mRNA_6239 0.31 -1.3
329,521 + 14607 mRNA_6239 0.82 -0.2
329,915 - -1.2
330,117 + +0.8
330,200 - -0.0
330,218 + -1.2
330,222 - +0.2
330,230 + +0.7
330,236 - +0.9
330,237 + -1.1
330,238 + +0.3
330,245 + -0.3
330,250 + +0.9
330,317 + +0.4
330,335 - +1.5
330,355 + +0.3
330,355 + +0.8
330,386 - +0.0
330,387 - +0.6
330,387 + +0.8
330,387 - +0.1
330,397 - +2.2
330,411 + -0.4
330,437 - +2.2
330,548 + +1.6
330,555 + -1.0
330,575 + +0.1
330,651 + -1.2
330,656 + +0.8
330,667 + -0.1
330,688 + +0.4
330,696 - +1.2
330,713 - -0.3
330,723 + +2.1
330,729 + +0.2
330,732 + -0.1

Or see this region's nucleotide sequence