Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6240

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6240: 14608 - SUPERFAMILY--SSF51445, at 330,943 to 332,434 14608

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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330,117 + +0.8
330,200 - -0.0
330,218 + -1.2
330,222 - +0.2
330,230 + +0.7
330,236 - +0.9
330,237 + -1.1
330,238 + +0.3
330,245 + -0.3
330,250 + +0.9
330,317 + +0.4
330,335 - +1.5
330,355 + +0.3
330,355 + +0.8
330,386 - +0.0
330,387 - +0.6
330,387 + +0.8
330,387 - +0.1
330,397 - +2.2
330,411 + -0.4
330,437 - +2.2
330,548 + +1.6
330,555 + -1.0
330,575 + +0.1
330,651 + -1.2
330,656 + +0.8
330,667 + -0.1
330,688 + +0.4
330,696 - +1.2
330,713 - -0.3
330,723 + +2.1
330,729 + +0.2
330,732 + -0.1
330,892 - +0.5
330,953 - -1.5
331,010 - -0.0
331,183 + 14608 mRNA_6240 0.16 -1.4
331,298 - 14608 mRNA_6240 0.24 +1.8
331,569 + 14608 mRNA_6240 0.42 +0.4
331,580 - 14608 mRNA_6240 0.43 +1.5
331,588 - 14608 mRNA_6240 0.43 -0.3
331,614 - 14608 mRNA_6240 0.45 -1.0
331,617 + 14608 mRNA_6240 0.45 +0.9
331,892 + 14608 mRNA_6240 0.64 +0.5
332,002 + 14608 mRNA_6240 0.71 +0.1
332,017 - 14608 mRNA_6240 0.72 -0.3
332,185 + 14608 mRNA_6240 0.83 -0.3
332,316 - +0.2
332,601 + +0.2
332,817 - +0.3
332,910 - +0.4
333,145 + +0.2
333,148 - -1.6
333,174 + +0.3
333,260 + -0.2
333,304 - -0.8
333,305 + +0.7
333,315 + -0.1
333,342 - +1.7
333,344 - -1.2
333,354 - +0.2
333,356 + +0.1

Or see this region's nucleotide sequence