Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6359

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14727 and 14728 are separated by 661 nucleotides mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630,775 to 633,081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633,743 to 634,504 14728

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
629,794 + -1.7
629,797 + +1.2
629,809 - -0.5
629,812 - +0.1
629,827 - -1.6
629,842 - +0.6
629,850 + -1.3
629,858 - -0.7
629,859 + -1.4
629,864 + -1.7
629,893 - -0.0
629,899 + +0.3
629,902 + +1.4
629,903 - -1.2
629,911 + -1.5
629,917 - -0.8
629,919 - +1.5
629,926 + +0.9
629,956 + -0.9
629,958 + +0.8
629,959 - +0.1
629,976 - +1.5
629,984 + -1.1
629,985 + +0.9
630,000 - -1.0
630,003 + +0.4
630,004 + +0.2
630,008 + +1.2
630,010 + -0.9
630,013 - +0.6
630,024 + -0.0
630,036 - +0.4
630,040 - -0.9
630,041 + -0.1
630,056 - +0.8
630,064 - -0.1
630,159 + +1.7
630,165 - -0.5
630,169 - -0.1
630,183 + +0.4
630,198 - +0.6
630,220 + -0.4
630,234 + +1.6
630,280 + -2.5
630,281 + -0.9
630,285 - -0.8
630,312 - -0.1
630,325 + +0.0
630,343 - +0.2
630,351 + -1.9
630,355 - +0.5
630,355 - +0.1
630,362 - -1.6
630,373 - -1.1
630,375 + +1.1
630,376 - -0.4
630,376 - -1.8
630,379 + +1.0
630,390 + -0.8
630,397 - +1.5
630,446 + +0.6
630,459 - +1.8
630,542 + +0.4
630,588 - +1.2
630,604 - +0.2
630,984 - +0.9
631,191 - 14727 mRNA_6359 0.18 -0.1
631,271 - 14727 mRNA_6359 0.21 +0.1
631,301 - 14727 mRNA_6359 0.23 -0.4
631,310 + 14727 mRNA_6359 0.23 -0.1
631,622 + 14727 mRNA_6359 0.37 +1.4
631,798 - 14727 mRNA_6359 0.44 -1.0
632,038 - 14727 mRNA_6359 0.55 +1.0
632,184 + 14727 mRNA_6359 0.61 +1.4
632,207 + 14727 mRNA_6359 0.62 -0.1
632,533 - 14727 mRNA_6359 0.76 -0.8
632,673 - 14727 mRNA_6359 0.82 -2.4
632,771 - 14727 mRNA_6359 0.87 -0.0
632,903 + -0.3
632,915 - -0.2
632,951 + -0.3
633,227 - -0.9
633,239 + -0.7
633,350 + -1.7
633,352 - -0.1
633,363 - +0.2
633,368 - -1.2
633,377 + -0.4
633,508 + +0.3
633,508 - -0.3
633,682 - +1.4
633,762 - +1.7

Or see this region's nucleotide sequence