Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6415

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14783 and 14784 are separated by 373 nucleotides mRNA_6415: 14783 - Hypothetical Protein, at 756,737 to 757,520 14783 mRNA_6416: 14784 - Hypothetical Protein, at 757,894 to 758,331 14784

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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755,872 + +0.2
755,887 - -0.8
755,897 - +1.0
755,905 + -1.4
755,912 - -1.1
755,925 + +0.5
756,039 - +0.3
756,041 - +0.6
756,082 + -2.4
756,211 + -0.4
756,216 + +0.3
756,331 - -1.1
756,338 - -0.8
756,468 + -0.5
756,507 + +0.3
756,509 - -2.5
756,525 - +2.3
756,756 + -0.8
757,119 - 14783 mRNA_6415 0.49 -0.9
757,673 + -0.2
757,681 - -1.1
757,806 + -0.5
757,974 + 14784 mRNA_6416 0.18 -0.0
758,117 + 14784 mRNA_6416 0.51 +1.7
758,270 + 14784 mRNA_6416 0.86 -0.2

Or see this region's nucleotide sequence