Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6681

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15048 and 15049 are separated by 735 nucleotides mRNA_6680: 15048 - K11430 EZH2 histone-lysine N-methyltransferase EZH2, at 1,427,504 to 1,431,076 15048 mRNA_6681: 15049 - Hypothetical Protein, at 1,431,812 to 1,432,661 15049

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,431,075 - +2.6
1,431,092 + -3.0
1,431,102 + +0.0
1,431,244 - +1.3
1,431,247 - -0.0
1,431,251 + +0.3
1,431,391 - +0.0
1,431,391 + -1.4
1,431,401 + -0.8
1,431,671 + +0.9
1,431,823 - -0.1
1,431,836 - +1.2
1,431,975 - 15049 mRNA_6681 0.19 -2.1
1,431,993 + 15049 mRNA_6681 0.21 +1.0
1,431,994 - 15049 mRNA_6681 0.21 -1.6
1,432,114 - 15049 mRNA_6681 0.36 +0.3
1,432,274 + 15049 mRNA_6681 0.54 -0.6
1,432,416 - 15049 mRNA_6681 0.71 +0.5
1,432,425 + 15049 mRNA_6681 0.72 +2.4
1,432,431 - 15049 mRNA_6681 0.73 -1.5
1,432,450 - 15049 mRNA_6681 0.75 -0.8
1,432,465 - 15049 mRNA_6681 0.77 -0.3
1,432,549 - 15049 mRNA_6681 0.87 +0.2
1,432,580 + +1.9
1,432,591 + -0.6
1,432,601 - +0.1
1,432,601 + -0.1
1,432,636 + -1.2
1,432,726 - -0.6
1,432,727 + +0.3
1,432,732 + +0.1
1,432,739 + +0.4
1,432,742 + -0.2
1,432,781 + +0.3
1,432,797 + -0.8
1,432,815 - +0.0
1,432,828 + -0.9
1,432,886 - -0.4
1,432,889 + -0.9
1,432,894 + +0.2
1,432,902 + -0.3
1,432,903 - -0.2
1,432,913 + -0.2
1,433,018 + +0.0
1,433,033 + +0.6
1,433,037 + -1.7
1,433,173 - -0.3
1,433,313 - -1.3
1,433,334 + -0.5
1,433,469 + +1.8
1,433,625 + -1.4

Or see this region's nucleotide sequence