Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6846

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6846: 15214 - K02603 ORC1 origin recognition complex subunit 1, at 260,829 to 263,990 15214

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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259,907 + -0.4
260,031 + +1.0
260,159 + +0.4
260,283 - -0.2
260,326 + -0.1
260,421 - +0.5
260,433 + -0.8
260,439 - +0.1
260,444 + +0.3
260,450 + +1.2
260,508 - +0.0
260,575 - +1.6
260,751 + +0.6
260,752 + +2.1
260,754 - -0.5
260,963 - +0.1
261,062 - +0.8
261,209 - 15214 mRNA_6846 0.12 +3.7
261,414 - 15214 mRNA_6846 0.19 -0.0
262,352 + 15214 mRNA_6846 0.48 +2.4
264,067 - -2.7
264,248 - +0.1
264,400 + -0.6
264,551 + -0.9
264,583 + -0.9
264,707 + +0.2
264,709 - -0.5
264,857 + -0.1
264,858 - -0.6
264,868 - +0.9
264,870 - -0.8
264,872 - -1.0
264,875 + -2.1
264,877 + -0.3
264,886 + -0.3
264,893 - +0.4
264,897 - +0.7
264,906 - -0.2
264,907 - +0.3
264,925 - +0.0
264,981 + -0.1

Or see this region's nucleotide sequence