Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7046

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15413 and 15414 are separated by 151 nucleotides15414 and 15415 are separated by 388 nucleotides mRNA_7045: 15413 - K20288 COG1 conserved oligomeric Golgi complex subunit 1, at 745,065 to 748,525 15413 mRNA_7046: 15414 - K01341 KEX2 kexin, at 748,677 to 751,864 15414 mRNA_7047: 15415 - K07466 RFA1, RPA1, rpa replication factor A1, at 752,253 to 754,600 15415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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748,358 - +1.0
748,683 - -0.5
749,942 + 15414 mRNA_7046 0.40 -0.2
751,872 - +1.6
752,133 - -0.9

Or see this region's nucleotide sequence