Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7359

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15726 and 15727 are separated by 170 nucleotides mRNA_7358: 15726 - Hypothetical Protein, at 84,759 to 87,914 15726 mRNA_7359: 15727 - KOG3130 Uncharacterized conserved protein, at 88,085 to 88,999 15727

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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88,420 - 15727 mRNA_7359 0.37 +0.4
88,431 + 15727 mRNA_7359 0.38 -1.6
88,455 - 15727 mRNA_7359 0.40 +0.0
88,860 - 15727 mRNA_7359 0.85 -1.1
88,876 + 15727 mRNA_7359 0.86 +0.8

Or see this region's nucleotide sequence