Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7851

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7851: 16219 - KOG0142 Isopentenyl pyrophosphate-dimethylallyl pyrophosphate isomerase, at 1,222,968 to 1,223,602 16219

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,222,206 - -1.1
1,222,440 - -0.1
1,222,600 - +0.6
1,222,701 - +0.4
1,222,975 + +0.4
1,222,992 + -0.6
1,223,051 + 16219 mRNA_7851 0.13 -1.9
1,223,257 + 16219 mRNA_7851 0.46 -1.6
1,223,501 + 16219 mRNA_7851 0.84 +1.2
1,223,577 + +0.9
1,223,588 + +0.2
1,223,588 + +2.3
1,223,595 - +0.4
1,223,620 + +0.6
1,223,740 + -0.4
1,223,746 - -0.8
1,224,076 - -1.3
1,224,105 - -0.3

Or see this region's nucleotide sequence