Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7918

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16285 and 16286 are separated by 194 nucleotides mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16,350 to 18,077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18,272 to 19,315 16286

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
17,331 + 16285 mRNA_7917 0.57 -0.8
17,480 - 16285 mRNA_7917 0.65 +2.5
17,684 - 16285 mRNA_7917 0.77 +0.8
17,789 - 16285 mRNA_7917 0.83 +0.7
17,900 + 16285 mRNA_7917 0.90 -1.4
18,055 + +0.1
18,058 - +1.5
18,219 + +0.5
18,322 - +1.0
18,351 - -0.5
18,358 - +2.8
18,417 - 16286 mRNA_7918 0.14 +2.2
18,480 - 16286 mRNA_7918 0.20 -0.5
18,788 - 16286 mRNA_7918 0.49 +2.1
18,791 - 16286 mRNA_7918 0.50 +0.7
18,915 + 16286 mRNA_7918 0.62 -1.6
18,916 - 16286 mRNA_7918 0.62 +0.3
19,036 + 16286 mRNA_7918 0.73 +1.9
19,095 + 16286 mRNA_7918 0.79 +0.8
19,100 - 16286 mRNA_7918 0.79 -0.2
19,378 - +0.5
19,588 + -2.9
19,654 - +0.9
19,764 - -1.5
19,817 - +0.4
19,831 - +1.0
19,837 + -0.0
19,914 + +1.3
19,934 - +2.0
19,935 + -1.1
20,235 + +1.1
20,291 - -1.2

Or see this region's nucleotide sequence