Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8119

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16486 and 16487 are separated by 295 nucleotides16487 and 16488 are separated by 985 nucleotides mRNA_8118: 16486 - Hypothetical Protein, at 456,909 to 458,986 16486 mRNA_8119: 16487 - Hypothetical Protein, at 459,282 to 461,489 16487 mRNA_8120: 16488 - Hypothetical Protein, at 462,475 to 468,297 16488

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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459,022 - +2.1
460,396 + 16487 mRNA_8119 0.50 +1.0
460,635 - 16487 mRNA_8119 0.61 -1.0
460,646 + 16487 mRNA_8119 0.62 -0.6
460,949 + 16487 mRNA_8119 0.75 -1.2
460,952 + 16487 mRNA_8119 0.76 +0.0
461,047 - 16487 mRNA_8119 0.80 -0.2
461,537 + -0.2
461,809 + -1.5
462,353 - +0.7
462,415 - -0.0

Or see this region's nucleotide sequence