Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8137

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16504 and 16505 are separated by 737 nucleotides16505 and 16506 are separated by 180 nucleotides mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502,588 to 504,412 16504 mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505,150 to 506,230 16505 mRNA_8138: 16506 - Hypothetical Protein, at 506,411 to 507,790 16506

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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504,375 + +0.1
504,562 + -0.3
504,776 + -0.3
504,955 + +0.9
505,077 - -0.5
505,090 + -1.7
505,221 + -0.7
505,359 + 16505 mRNA_8137 0.19 -0.0
506,146 + +1.4
506,259 + +0.4
506,261 + +2.1
506,284 - -0.2
506,416 + -0.7
506,996 - 16506 mRNA_8138 0.42 -1.9
506,999 - 16506 mRNA_8138 0.43 -0.7

Or see this region's nucleotide sequence