Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8305

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16672 and 16673 are separated by 491 nucleotides16673 and 16674 are separated by 414 nucleotides mRNA_8304: 16672 - K01336 E3.4.21.48 cerevisin, at 892,725 to 894,788 16672 mRNA_8305: 16673 - Hypothetical Protein, at 895,280 to 896,635 16673 mRNA_8306: 16674 - Hypothetical Protein, at 897,050 to 897,488 16674

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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894,311 - 16672 mRNA_8304 0.77 -0.4
894,761 + +0.2
895,973 + 16673 mRNA_8305 0.51 +0.5
896,109 - 16673 mRNA_8305 0.61 +0.8
896,380 - 16673 mRNA_8305 0.81 -1.2
896,543 + +1.4
896,667 - +1.9
896,723 + +0.5
896,814 - +1.4
896,844 + +1.6
897,122 + 16674 mRNA_8306 0.16 -0.5
897,261 - 16674 mRNA_8306 0.48 -1.1
897,265 - 16674 mRNA_8306 0.49 +0.9
897,266 + 16674 mRNA_8306 0.49 +0.3
897,283 + 16674 mRNA_8306 0.53 -0.9
897,416 + 16674 mRNA_8306 0.83 -0.2
897,435 + 16674 mRNA_8306 0.88 -0.1

Or see this region's nucleotide sequence