Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8389

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16757 and 16758 are separated by 151 nucleotides mRNA_8389: 16757 - Hypothetical Protein, at 1,098,543 to 1,099,640 16757 mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1,099,792 to 1,101,469 16758

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,097,567 - +0.5
1,097,605 - -0.0
1,097,727 + -0.1
1,097,757 + -0.0
1,097,757 - +0.8
1,097,897 + +0.1
1,097,996 + -0.2
1,098,052 - -0.9
1,098,337 + +1.4
1,098,444 - -0.6
1,098,464 - -1.0
1,098,632 - -0.2
1,098,652 + +0.3
1,098,653 + 16757 mRNA_8389 0.10 -0.1
1,098,807 - 16757 mRNA_8389 0.24 +0.5
1,098,925 + 16757 mRNA_8389 0.35 +0.6
1,098,926 + 16757 mRNA_8389 0.35 +0.3
1,098,983 - 16757 mRNA_8389 0.40 +0.5
1,099,090 + 16757 mRNA_8389 0.50 +1.5
1,099,227 + 16757 mRNA_8389 0.62 -0.4
1,099,383 - 16757 mRNA_8389 0.77 -0.1
1,099,414 - 16757 mRNA_8389 0.79 +0.5
1,099,636 - -0.4
1,099,644 + -0.3
1,099,949 + -1.1
1,099,957 + -0.5
1,100,118 - 16758 mRNA_8390 0.19 +0.8
1,100,207 + 16758 mRNA_8390 0.25 -2.1
1,100,237 - 16758 mRNA_8390 0.27 -0.5

Or see this region's nucleotide sequence