Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_967

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_967: 9335 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 94,555 to 95,203 9335

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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93,563 + +0.9
93,591 + +0.0
93,729 - +0.2
93,733 - -1.2
93,735 + -1.2
93,852 - -0.2
93,861 - -0.2
93,876 + -0.4
93,885 - +0.1
93,997 + +0.3
94,011 + -0.1
94,024 + -0.3
94,057 - -0.2
94,163 + +1.1
94,472 + -1.3
94,592 - +0.1
94,636 - 9335 mRNA_967 0.12 +0.5
95,313 - -1.1
95,626 - -0.4
95,634 + +0.7
95,783 + -1.7
95,922 - -0.5
95,956 - +1.0
96,046 + +0.5
96,072 - +0.9
96,074 - -0.2
96,090 + -1.1
96,189 - -0.3
96,203 - +0.6

Or see this region's nucleotide sequence