Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1302

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9669 and 9670 are separated by 296 nucleotides mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864,928 to 866,257 9669 mRNA_1302: 9670 - Hypothetical Protein, at 866,554 to 866,811 9670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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866,339 + -2.7
866,340 - -1.2
866,364 + -0.6
866,395 + -0.5
866,457 + -1.1
866,657 - 9670 mRNA_1302 0.40 -0.5
866,701 - 9670 mRNA_1302 0.57 +0.9
866,794 + -1.2
866,851 - -1.6
866,859 + -0.8
866,863 - -0.1
866,895 + -2.1
866,900 + -2.0
866,921 + -0.7
866,953 - +0.4
866,954 - -0.4
866,955 - -1.4
866,969 - -0.1
866,969 + -0.8
867,045 + +0.4
867,051 + +0.1
867,052 - -0.2
867,066 - -1.3
867,066 - -0.2
867,070 - -0.6
867,073 - +0.0
867,133 + -0.4
867,133 + +0.7
867,136 - -1.7
867,140 + +0.4
867,143 - -1.3
867,152 + -0.5
867,154 - -0.5
867,160 - +1.0
867,242 - -0.1
867,307 - +1.1
867,321 - +0.1
867,334 - -0.1
867,623 - +0.6
867,643 - +0.9

Or see this region's nucleotide sequence