Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1347

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1347: 9715 - Hypothetical Protein, at 52,711 to 53,943 9715

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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51,856 - -0.1
51,871 - -0.4
51,877 + +1.5
51,886 + -0.1
52,002 - -0.7
52,018 + -0.6
52,342 - -0.4
52,457 + +1.9
52,467 + +0.2
52,687 - +0.9
52,888 - 9715 mRNA_1347 0.14 +0.2
53,642 - 9715 mRNA_1347 0.76 +0.8
53,653 + 9715 mRNA_1347 0.76 +0.3
53,711 + 9715 mRNA_1347 0.81 -0.9
53,864 + -0.9
53,899 + +0.6
54,018 + -1.0
54,024 + -0.4
54,037 - -0.1
54,050 + +1.3
54,059 + -0.2
54,062 - +0.7
54,071 + +0.5
54,192 + -0.0
54,210 + +0.6
54,473 + +0.9
54,480 + -0.7
54,643 - +1.8
54,741 + +0.7

Or see this region's nucleotide sequence