Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1364

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9731 and 9732 are separated by 779 nucleotides mRNA_1363: 9731 - K11147 DHRS4 dehydrogenase/reductase SDR family member 4, at 98,069 to 99,768 9731 mRNA_1364: 9732 - SUPERFAMILY--SSF48452, at 100,548 to 102,445 9732

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
99,605 + -1.1
99,769 - +2.0
99,905 - -1.4
99,910 + -0.2
99,921 + -0.0
99,927 + +1.9
99,929 + +0.1
99,956 - -0.4
100,052 + -0.4
100,211 - -1.0
100,243 - +0.2
100,386 + -0.4
100,933 + 9732 mRNA_1364 0.20 -0.0
101,353 + 9732 mRNA_1364 0.42 -0.2
101,378 + 9732 mRNA_1364 0.44 -0.1
102,343 + -0.8
102,560 + +0.4
102,685 - -1.1
102,697 - -0.3
102,698 + +1.9
102,704 + -0.7
102,818 - +0.3
102,856 + -2.0
102,857 + -1.4

Or see this region's nucleotide sequence