Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1647

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10015 and 10016 are separated by 461 nucleotides mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800,171 to 801,820 10015 mRNA_1648: 10016 - K11436 PRMT3 type I protein arginine methyltransferase, at 802,282 to 804,374 10016

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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799,633 - -0.6
799,773 - +0.7

Or see this region's nucleotide sequence