Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1907

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1907: 10275 - Hypothetical Protein, at 487,882 to 489,189 10275

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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487,081 + +0.9
487,155 - -0.7
487,210 - -0.7
487,330 + -0.8
487,473 + -0.4
487,486 + -1.7
487,494 - -1.0
487,494 + -0.4
487,497 + -2.6
487,499 - -1.5
487,508 - -2.6
487,517 + -0.0
487,610 + +0.1
487,777 + -2.4
487,781 - +0.2
487,792 - -0.7
487,801 + +0.3
487,814 - -2.6
487,947 + +0.4
488,388 + 10275 mRNA_1907 0.39 -2.1
489,277 + +0.7
489,279 + -0.4
489,852 - -2.8
490,154 + -0.7

Or see this region's nucleotide sequence