Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2041

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2041: 10409 - HMMPfam-SAM domain (Sterile alpha motif)-PF00536,ProSiteProfiles-SAM domain profile.-PS50105,SUPERFAMILY--SSF47769, at 815,256 to 815,459 10409

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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814,314 + -0.0
814,862 + -1.1
814,882 + -1.5
814,886 + -2.5
814,892 - -1.8
814,908 - -2.1

Or see this region's nucleotide sequence