Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2042

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10410 and 10411 are separated by 924 nucleotides mRNA_2042: 10410 - K11228 STE11 mitogen-activated protein kinase kinase kinase, at 818,580 to 819,652 10410 mRNA_2043: 10411 - Hypothetical Protein, at 820,577 to 820,768 10411

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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819,246 - 10410 mRNA_2042 0.62 +0.3
819,650 - -2.1
819,922 + -0.6
819,943 + -1.3
819,944 - +0.5
819,950 - +1.7
819,993 + -0.1
820,019 - -2.2
820,077 - +3.1
820,092 - -1.6
820,128 + -0.2

Or see this region's nucleotide sequence