Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2329

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2329: 10697 - K10908 POLRMT, RPO41 DNA-directed RNA polymerase, mitochondrial, at 622,463 to 626,733 10697

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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621,465 - -0.5
621,465 - -1.3
621,473 - +0.0
621,481 + +0.6
621,614 - -1.7
621,629 + -2.3
621,752 + -1.2
621,760 + -0.9
621,766 - -0.8
621,784 - +0.9
621,787 - -1.0
621,788 + -1.2
621,903 - -0.5
621,913 - -1.4
621,917 - -0.3
622,055 - +1.4
622,064 - +0.7
622,068 - -3.4
622,071 + -1.8
622,078 + +3.7
622,210 + +1.5
622,217 - -1.6
626,888 - -0.6
626,891 - -0.2
626,996 + -2.8
627,025 - -2.7
627,030 + -0.8
627,054 + -1.9
627,172 - -2.7
627,172 + -0.6
627,189 + +0.3
627,196 - -2.8
627,213 - -1.1
627,312 - -0.8
627,324 + -3.1
627,353 - -0.8
627,373 + -1.7
627,379 + -1.7
627,487 - +0.3
627,508 + -2.0
627,609 - -1.2
627,648 + -2.7
627,665 + -2.0
627,665 + +1.5
627,683 - +1.1

Or see this region's nucleotide sequence