Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2774

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11142 and 11143 are separated by 369 nucleotides mRNA_2774: 11142 - K02991 RP-S6e, RPS6 small subunit ribosomal protein S6e, at 180,675 to 181,907 11142 mRNA_2775: 11143 - KOG1646 40S ribosomal protein S6, at 182,277 to 183,930 11143

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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180,287 - -1.7
182,070 - +0.6
182,071 + -0.6
182,079 - -4.1
182,080 - +0.2
182,083 + -0.1
182,087 + -0.4
182,110 + -2.2
182,153 - +0.4
182,257 + -0.8
182,261 - +0.2
182,593 - 11143 mRNA_2775 0.19 -2.5
182,597 + 11143 mRNA_2775 0.19 -0.5
182,713 - 11143 mRNA_2775 0.26 -1.0

Or see this region's nucleotide sequence