Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3217

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3217: 11585 - Hypothetical Protein, at 116,646 to 116,855 11585

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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115,738 - -0.3
115,856 + -2.0
116,096 + -2.8
116,113 + -0.5
116,115 - -0.7
116,323 - -2.5
116,339 + -2.5
116,446 - -0.1
116,542 + +1.3
116,864 + +1.4
116,930 - +1.9
116,958 - -1.9
117,239 - -1.5
117,368 - -1.3
117,804 - -2.5

Or see this region's nucleotide sequence