Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3265

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11632 and 11633 are separated by 95 nucleotides mRNA_3264: 11632 - K08495 GOSR1, GOS1 golgi SNAP receptor complex member 1, at 243,913 to 244,924 11632 mRNA_3265: 11633 - Hypothetical Protein, at 245,020 to 245,530 11633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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245,604 - -0.9
245,608 - +0.1
245,610 + -0.9
245,610 + -0.9
245,626 + -0.2
245,749 - -2.5
245,751 - -0.7
245,770 + -0.7
245,774 + -1.3
245,902 + -1.0
246,365 - -3.9
246,493 - -0.6

Or see this region's nucleotide sequence