Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3332

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11700 and 11701 are separated by 152 nucleotides mRNA_3332: 11700 - K17424 MRPL43 large subunit ribosomal protein L43, at 411,009 to 411,517 11700 mRNA_3333: 11701 - K05283 PIGW phosphatidylinositol glycan, class W, at 411,670 to 413,695 11701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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410,349 + -0.9
410,910 + -0.6
410,919 + -2.8
410,921 - -0.8
410,948 - +0.1

Or see this region's nucleotide sequence