Experiment: 40 hrs No Buoyancy Separation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
12492 and 12493 are separated by 471 nucleotides 12493 and 12494 are separated by 911 nucleotides
mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,405,556 to 1,407,296
12492
mRNA_4125: 12493 - KOG0627 Heat shock transcription factor, at 1,407,768 to 1,409,382
12493
mRNA_4126: 12494 - K20408 WDR24 WD repeat-containing protein 24, at 1,410,294 to 1,414,666
12494
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Per-strain Table Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation remove 1,406,804 - 12492 mRNA_4124 0.72 -1.5 1,406,882 - 12492 mRNA_4124 0.76 -0.9 1,407,032 - 12492 mRNA_4124 0.85 -0.8 1,407,151 - -0.5 1,407,180 - -2.0 1,407,308 - -1.8 1,407,454 + -0.6 1,407,456 - -0.4 1,407,467 - -1.2 1,407,474 - +0.4 1,407,474 - -2.3 1,407,475 + -0.1 1,407,475 + -0.6 1,407,477 + +0.3 1,407,477 - -2.9 1,407,479 - -2.5 1,407,490 - -0.4 1,407,490 + -1.3 1,407,492 - -1.6 1,407,493 + -1.4 1,407,495 - -2.7 1,407,504 + -3.7 1,407,512 + -0.2 1,407,530 + -1.9 1,407,532 + -2.7 1,407,681 + -1.3 1,407,817 + +0.1 1,407,950 - 12493 mRNA_4125 0.11 -0.5 1,408,102 + 12493 mRNA_4125 0.21 -3.8 1,408,200 + 12493 mRNA_4125 0.27 -1.9 1,408,251 + 12493 mRNA_4125 0.30 -0.8 1,408,258 - 12493 mRNA_4125 0.30 -4.0 1,408,401 + 12493 mRNA_4125 0.39 +0.0 1,408,681 - 12493 mRNA_4125 0.57 -3.6 1,408,720 - 12493 mRNA_4125 0.59 -0.2 1,408,729 + 12493 mRNA_4125 0.60 -0.3 1,408,814 - 12493 mRNA_4125 0.65 -3.3 1,408,839 - 12493 mRNA_4125 0.66 +1.0 1,408,982 - 12493 mRNA_4125 0.75 -0.7 1,409,006 - 12493 mRNA_4125 0.77 +0.5 1,409,016 + 12493 mRNA_4125 0.77 -0.6 1,409,023 + 12493 mRNA_4125 0.78 -2.6 1,409,028 - 12493 mRNA_4125 0.78 +0.5 1,409,038 - 12493 mRNA_4125 0.79 -0.7 1,409,071 - 12493 mRNA_4125 0.81 -0.6 1,409,127 - 12493 mRNA_4125 0.84 -0.3 1,409,134 + 12493 mRNA_4125 0.85 -2.2 1,409,183 - 12493 mRNA_4125 0.88 -1.6 1,409,208 + 12493 mRNA_4125 0.89 -1.8 1,409,276 + -4.5 1,409,289 - -1.8 1,409,341 - -0.4 1,409,351 + -3.3 1,409,361 - -1.3 1,409,435 - -1.2 1,409,437 - -1.6 1,409,438 + -0.2 1,409,439 - -3.2 1,409,445 + -0.8 1,409,447 + +0.9 1,409,460 + -2.6 1,409,463 - +1.4 1,409,463 + -3.7 1,409,463 + -1.8 1,409,466 + -0.8 1,409,467 - -1.8 1,409,468 - -2.3 1,409,469 - +0.2 1,409,469 - -1.1 1,409,470 - -3.0 1,409,472 + -3.5 1,409,473 + -2.0 1,409,474 - -0.9 1,409,475 + -0.2 1,409,475 + -1.3 1,409,475 + -1.3 1,409,476 + -2.0 1,409,477 + -1.2 1,409,481 + -1.8 1,409,485 + -1.8 1,409,488 + -0.3 1,409,514 + -2.3 1,409,520 - -1.3 1,409,521 + -1.0 1,409,583 - -2.0 1,409,595 + -3.9 1,409,601 - -2.5 1,409,614 + -2.3 1,409,614 + -1.0 1,409,617 + -0.8 1,409,618 - +1.1 1,409,619 - -1.2 1,409,620 - -1.7 1,409,624 - -2.0 1,409,625 - +0.5 1,409,627 - +0.1 1,409,627 + -1.7 1,409,628 + +0.2 1,409,634 + -1.6 1,409,647 + -1.3 1,409,654 - -1.9 1,409,676 + -1.6 1,409,711 - -2.1 1,409,714 - -2.4 1,409,733 - +0.1 1,409,749 - -1.8 1,409,760 - -1.5 1,409,760 + -0.5 1,409,763 - -1.8 1,409,764 - -3.8 1,409,778 - -1.7 1,409,781 + -0.6 1,409,785 + -0.6 1,409,798 - -0.3 1,409,798 - -2.2 1,409,798 - -0.2 1,409,798 - +0.1 1,409,800 + -0.7 1,409,801 + -3.5 1,409,831 - -1.9 1,409,897 - -1.0 1,409,907 + -1.0 1,409,908 - -3.3 1,409,927 - -1.0 1,409,928 + -0.6 1,409,929 + -0.9 1,409,932 - -0.8 1,409,934 - -2.8 1,409,940 - -0.0 1,409,963 - -0.7 1,409,965 + -0.5 1,409,974 - -0.5 1,409,998 + -0.7 1,410,029 - +0.6 1,410,044 + -2.1 1,410,044 + +0.4 1,410,045 - -3.9 1,410,047 + -1.4 1,410,050 + -0.2 1,410,064 - -0.4 1,410,070 + -0.4 1,410,077 - -0.1 1,410,090 - +0.5 1,410,092 + -1.4 1,410,096 + -2.0 1,410,118 + -1.8 1,410,123 - -1.9 1,410,142 - -1.3 1,410,151 + -1.4 1,410,155 + -2.0 1,410,197 - -2.7 1,410,203 + -1.2 1,410,218 - -1.0 1,410,223 - -0.1 1,410,236 + -2.0 1,410,237 - -0.9 1,410,248 + -0.1 1,410,256 - -0.5 1,410,257 + -1.5 1,410,258 - -2.6 1,410,364 - -1.7 1,410,365 + -0.5 1,410,369 - +1.0
Or see this region's nucleotide sequence