Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4614

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4614: 12982 - BLAST B-cell lymphoma/leukemia 11B [Orchesella cincta], at 599,897 to 601,386 12982

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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598,909 - +0.7
599,043 + -0.1
599,058 - +0.0
599,061 + -1.1
599,084 + -3.3
599,095 + -3.3
599,493 - +1.8
599,611 - -2.2
599,905 + +1.8
599,944 + -0.4
600,487 + 12982 mRNA_4614 0.40 -3.6
600,763 - 12982 mRNA_4614 0.58 -0.9
602,271 + -0.7

Or see this region's nucleotide sequence