Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4755

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13123 and 13124 are separated by 305 nucleotides mRNA_4755: 13123 - Hypothetical Protein, at 934,483 to 935,126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935,432 to 936,982 13124

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
933,584 - -3.2
933,598 + -1.9
933,737 + -1.3
933,760 + -0.9
933,760 + -1.2
933,770 + -0.9
933,874 - -3.4
933,878 + -0.3
933,914 + -0.1
934,279 - -0.8
934,279 - -2.9
934,286 + -1.2
934,334 - -1.3
934,633 - 13123 mRNA_4755 0.23 -0.6
934,740 + 13123 mRNA_4755 0.40 -1.4
934,913 + 13123 mRNA_4755 0.67 +1.1
935,004 - 13123 mRNA_4755 0.81 -2.4
935,059 + 13123 mRNA_4755 0.89 -0.6
935,062 + -1.5
935,339 - -1.8
935,339 - -2.3
935,343 + -3.6
935,346 + -2.4
935,400 - -2.3
935,506 - -1.8
935,640 + 13124 mRNA_4756 0.13 -1.8
935,890 - 13124 mRNA_4756 0.30 -1.1
935,987 - 13124 mRNA_4756 0.36 -1.3
936,108 + 13124 mRNA_4756 0.44 -1.3

Or see this region's nucleotide sequence