Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4791

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13159 and 13160 are separated by 940 nucleotides mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,020,628 + -1.3
1,020,742 + -2.3
1,021,367 - -2.1
1,021,455 - -1.3
1,021,910 + 13159 mRNA_4791 0.26 -3.4
1,022,383 + 13159 mRNA_4791 0.63 -0.2
1,022,536 + 13159 mRNA_4791 0.74 -1.4
1,022,557 - 13159 mRNA_4791 0.76 +0.3
1,022,586 - 13159 mRNA_4791 0.78 -1.6
1,022,689 - 13159 mRNA_4791 0.86 -3.0
1,023,135 - -3.5
1,023,154 + -3.4
1,023,295 + -0.4
1,023,414 - -0.6
1,023,429 + -0.3
1,023,448 + -0.6
1,023,525 - +0.2
1,023,707 - -3.6

Or see this region's nucleotide sequence