Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4806

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13174 and 13175 are separated by 326 nucleotides mRNA_4806: 13174 - Hypothetical Protein, at 1,057,204 to 1,058,778 13174 mRNA_4807: 13175 - K03119 tauD taurine dioxygenase, at 1,059,105 to 1,060,772 13175

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,056,348 + +1.3
1,056,491 + -0.9
1,056,638 - -0.8
1,056,787 + -1.5
1,056,797 + +0.2
1,056,803 + +1.0
1,056,901 - -0.8
1,057,067 + -0.6
1,057,089 + -2.2
1,057,100 - -1.6
1,057,113 - -2.7
1,057,368 + 13174 mRNA_4806 0.10 -2.0
1,057,381 + 13174 mRNA_4806 0.11 +0.4
1,057,398 + 13174 mRNA_4806 0.12 -2.0
1,057,806 - 13174 mRNA_4806 0.38 -1.1
1,057,929 - 13174 mRNA_4806 0.46 -2.0
1,057,972 - 13174 mRNA_4806 0.49 -2.0
1,058,221 + 13174 mRNA_4806 0.65 -1.4
1,058,237 - 13174 mRNA_4806 0.66 -1.7
1,058,663 - -3.1
1,058,866 - -0.9
1,058,996 - -3.0

Or see this region's nucleotide sequence