Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5242

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5242: 13610 - K02932 RP-L5e, RPL5 large subunit ribosomal protein L5e, at 243,253 to 244,505 13610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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242,735 - -0.1
242,741 - +0.2
242,872 + -0.3
242,874 + -0.3
242,876 + -0.1
242,877 - +1.4
242,888 + -0.4
242,900 - +0.2
243,004 - -3.6
243,013 + -0.3
243,033 - -1.4
243,045 + -2.7
243,049 - -3.4
243,052 + -0.8
245,142 + -2.8
245,303 + -1.9
245,426 - +0.5

Or see this region's nucleotide sequence