Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5665

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14033 and 14034 are separated by 386 nucleotides mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634,205 to 636,873 14033 mRNA_5666: 14034 - Hypothetical Protein, at 637,260 to 638,584 14034

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
633,287 + +0.5
633,552 + -3.0
633,581 + -0.8
633,799 - -0.9
633,990 - -0.6
634,167 + -1.5
634,280 + +0.1
634,534 + 14033 mRNA_5665 0.12 -2.6
634,541 - 14033 mRNA_5665 0.13 -1.9
634,998 - 14033 mRNA_5665 0.30 -0.9
635,001 - 14033 mRNA_5665 0.30 -2.7
635,239 + 14033 mRNA_5665 0.39 -3.6
635,331 - 14033 mRNA_5665 0.42 -3.0
635,338 + 14033 mRNA_5665 0.42 -1.2
635,370 - 14033 mRNA_5665 0.44 -2.6
635,439 - 14033 mRNA_5665 0.46 -1.8
635,674 - 14033 mRNA_5665 0.55 -2.2
635,823 - 14033 mRNA_5665 0.61 -1.5
635,841 + 14033 mRNA_5665 0.61 -0.6
635,887 - 14033 mRNA_5665 0.63 -0.7
635,897 + 14033 mRNA_5665 0.63 -2.3
636,039 + 14033 mRNA_5665 0.69 +0.5
636,187 + 14033 mRNA_5665 0.74 -2.0
636,308 + 14033 mRNA_5665 0.79 -1.4
636,470 + 14033 mRNA_5665 0.85 -1.0
636,595 + 14033 mRNA_5665 0.90 -1.9
636,599 + 14033 mRNA_5665 0.90 -2.9
636,752 + -2.0
637,034 - -0.0
637,064 + -0.8
637,165 - -2.1
637,167 - -0.4
637,180 + -2.3
637,180 + +0.5
637,180 + +0.2
637,180 + +0.1
637,180 + -0.4
637,181 + +0.4
637,182 - -2.7
637,182 + -3.1
637,183 + -0.7
637,183 - -1.8
637,196 - -1.4
637,335 + -1.9
637,354 - -2.4
637,359 - -1.2
637,360 - +1.9
637,412 - 14034 mRNA_5666 0.11 -2.5
637,466 + 14034 mRNA_5666 0.16 -1.2
637,487 - 14034 mRNA_5666 0.17 -4.0
637,493 - 14034 mRNA_5666 0.18 -3.7
637,513 + 14034 mRNA_5666 0.19 -0.5
637,596 + 14034 mRNA_5666 0.25 -1.9
637,654 + 14034 mRNA_5666 0.30 +0.6

Or see this region's nucleotide sequence