Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5740

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14107 and 14108 are separated by 448 nucleotides mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719 14108

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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821,474 - 14108 mRNA_5740 0.30 -1.3
821,598 + 14108 mRNA_5740 0.37 -0.2
822,906 - -0.7
822,908 - -0.8
822,911 - -0.8
822,919 - -1.6
822,925 - -1.4
822,927 - -0.9
822,941 - -0.8

Or see this region's nucleotide sequence